get_subsequences_all_sequences()

Counts the number of distinct subsequences for each sequence.

Function

from sequenzo import get_subsequences_all_sequences
result = get_subsequences_all_sequences(seqdata, dss=True, with_missing=False)

Parameters

• seqdata: SequenceData object.
• dss: remove consecutive duplicates before counting.
• with_missing: include missing states during counting.

Returns

DataFrame with subsequence counts per sequence.

TraMineR Mapping

• Equivalent TraMineR function: seqsubsn.

Author

Code and documentation: Yuqi Liang

References

Ritschard, G. (2023), "Measuring the nature of individual sequences", Sociological Methods and Research, 52(4), 2016-2049. doi:10.1177/00491241211036156.