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Sequence Summary Statistics

Sequence summary statistics describe sequence datasets at the sample, time-point, or group level. Use them to understand what the data look like before fitting models or interpreting clusters.

Choose a Summary

QuestionUseful pages
How many unique trajectories are present?Distinct State Sequences
How long are states and spells on average?State Spell Durations, Mean Time by State
Which states dominate by time point or by individual?Individual State Distribution, Modal State Sequence
How long are the sequences and how many transitions occur?Sequence Length Summary, Transition Count Summary
How do I summarize weighted numeric values?Weighted Mean, Weighted Variance, Weighted Five-Number Summary
How do I translate an R workflow?Sequenzo and TraMineR Mapping

Statistics vs. Indicators

Use sequence summary statistics when you need a dataset-level, time-point-level, or group-level summary. Use Sequence Characteristics Indicators when you need a value for each individual sequence.

Authors

Sequenzo is released under the BSD-3-Clause License; this documentation site source is licensed under MIT.